Log to sana01

Analysis environment is setup on sana01 server. All software is inside the ~/nptool folder.

tree -L nptool
nptool/
├── fasterv2
├── micromamba
├── npgui
├── nptool
├── nptool_project
├── ridf
├── setup_ribfana04.sh
└── setup.sh

The environment coud be setup using the setup.sh script, or calling the np_setup shortcut command:

np_setup

Running workflow:

To run the workflow use the following command:

snakemake --configfile workflow/config.yaml --cores 5 -n -d /home/s074/rootfiles/nebulaplus/reprocess

You can adjust the run range by editing the workflow/config.yaml file.